Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_18036513_18039220_F

Intron Information:

Intron Rank:

135686

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18036513 - 18039220

Intron Length:

2708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TTTGTGATGTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TCTTTCAAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

75.5

34.3

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

49.7

-0

1.8

62.7

47.3

Minor 5ss

38.2

-1.3

2.8

51.4

39.2

Minor BPS

57.9

0.33

80.09

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023028

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037231

18036025 - 18039527

3503