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Intron Name: Anas_platyrhynchos_platyrhynchos_12_18050138_18056281_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18050138 - 18056281

Intron Length:

6144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

AGACGTCTAACG

Flanking Amino Acid:

ENLRVLPNNTETIPAESANT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

79.4

29.5

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

75.1

0.57

0.8

69.2

31.4

Minor 5ss

38.6

-1.3

3.3

53.2

Minor BPS

42.8

-0.6

45.83

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011331

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029265

18049520 - 18071170

21651

ENSAPLT00000011830

18049520 - 18072949

23430