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Intron Name: Anas_platyrhynchos_platyrhynchos_12_18058442_18065737_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18058442 - 18065737

Intron Length:

7296

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCGTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAC

U12 Branch Point Sequence:

TCCCAGCTAACA

Flanking Amino Acid:

KCFRAGMKKEAVQNERDRIS

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

60.6

0.26

1.1

61.4

34.2

Major PPT

76.5

0.6

0.9

72.6

37.6

Minor 5ss

31.6

-2.1

3.3

41.1

45.4

Minor BPS

41.7

-0.6

2.4

54.31

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011331

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038235

18056158 - 18074792

18635

ENSAPLT00000029265

18049520 - 18071170

21651

ENSAPLT00000011830

18049520 - 18072949

23430