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Intron Name: Anas_platyrhynchos_platyrhynchos_12_18071691_18072812_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18071691 - 18072812

Intron Length:

1122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTATGTGTC

5'SS Class:

weak_major

3'SS Sequence:

TTCTCTCCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ACCATTCTAATT

Flanking Amino Acid:

MSSVIHTVPDPSPEPSLPSP

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.8

0.3

1.3

63.6

41.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

81.5

0.71

0.7

76.3

25.9

Minor 5ss

45.2

-0.5

3.1

65.2

39.7

Minor BPS

-0.1

1.6

58.55

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011331

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038235

18056158 - 18074792

18635

ENSAPLT00000011830

18049520 - 18072949

23430