Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_18080017_18084650_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18080017 - 18084650

Intron Length:

4634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCCAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCCCTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

GGTTTCTCAACA

Flanking Amino Acid:

SIKPERAHHCSICKRCIRKM

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

70.6

41.3

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

81.9

0.72

0.6

81.5

23.5

Minor 5ss

45.6

-0.5

2.9

64.4

Minor BPS

66.4

0.51

1.5

73.24

38.1

Associated Gene:

Gene:

ZDHHC7

Ensembl Gene ID:

ENSAPLG00000011224

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020795

18077264 - 18095559

18296

ENSAPLT00000011690

18077264 - 18089859

12596