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Intron Name: Anas_platyrhynchos_platyrhynchos_12_18321950_18329879_F

Intron Information:

Intron Rank:

138439

Intron Class:

major

Intron Phase:

Intron Coordinates:

18321950 - 18329879

Intron Length:

7930

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTGCTTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTTAC

U12 Branch Point Sequence:

TTTACCCAAAGG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

80.7

31.7

Major BPS

0.27

1.2

55.4

41.7

Major PPT

79.8

0.67

0.9

37.2

Minor 5ss

42.5

-0.8

3.5

64.3

47.2

Minor BPS

45.9

-0.4

2.3

60.76

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043927

18320850 - 18329915

9066