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Intron Name: Anas_platyrhynchos_platyrhynchos_12_18475490_18477343_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18475490 - 18477343

Intron Length:

1854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCGC

5'SS Class:

strong_major

3'SS Sequence:

CCCTGTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACCCAC

U12 Branch Point Sequence:

ACGGCTGACACT

Flanking Amino Acid:

QNSHNTAELQGIPRYHSQSP

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

63.9

42.4

Major BPS

54.6

0.11

1.2

64.4

33.8

Major PPT

75.4

0.57

0.8

68.6

31.8

Minor 5ss

25.7

-2.8

3.1

32.8

42.2

Minor BPS

35.5

-1

2.4

48.52

45.4

Associated Gene:

Gene:

FOXF1

Ensembl Gene ID:

ENSAPLG00000019903

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031288

18474094 - 18478139

4046