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Intron Name: Anas_platyrhynchos_platyrhynchos_12_18517980_18527867_R

Intron Information:

Intron Rank:

152524

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18517980 - 18527867

Intron Length:

9888

Sequence Information:

Terminal Dinucleotides:

GT-GG

5'SS Sequence:

CAG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTTGGTGG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TAATTGTTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

77.8

38.7

Major BPS

71.2

0.53

70.3

31.9

Major PPT

44.4

-0.3

3.2

72.9

37.4

Minor 5ss

32.4

-2

40.4

45.7

Minor BPS

47.6

-0.1

2.4

64.72

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018568

18517768 - 18529066

11299