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Intron Name: Anas_platyrhynchos_platyrhynchos_12_18708310_18710397_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18708310 - 18710397

Intron Length:

2088

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTCCC

5'SS Class:

major

3'SS Sequence:

TCTCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

CCGGCCTCACTC

Flanking Amino Acid:

ISASDSSSQNLMQHFKKCIK

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

63.1

41.5

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

78.7

0.65

0.7

73.3

24.9

Minor 5ss

38.4

-1.3

56.1

40.8

Minor BPS

43.4

-0.5

1.9

45.3

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029273

18704309 - 18714127

9819

ENSAPLT00000028993

18704309 - 18713122

8814