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Intron Name: Anas_platyrhynchos_platyrhynchos_12_18844835_18845587_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18844835 - 18845587

Intron Length:

753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGGGCA

5'SS Class:

major

3'SS Sequence:

TTTTTTTCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

GCTCCTTTAACC

Flanking Amino Acid:

LMKFIYTSQYDNCLTYRRIY

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

60.4

38.8

Major BPS

77.3

0.68

79.3

29.4

Major PPT

91.4

0.93

0.6

87.9

22.3

Minor 5ss

30.8

-2.2

3.5

35.3

42.1

Minor BPS

71.8

0.66

1.2

72.5

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005548

18842536 - 18848215

5680

ENSAPLT00000034858

18842536 - 18846916

4381