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Intron Name: Anas_platyrhynchos_platyrhynchos_12_18870688_18872668_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18870688 - 18872668

Intron Length:

1981

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCGTTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCCAAA

U12 Branch Point Sequence:

TGGTGCCAAAGG

Flanking Amino Acid:

RGDAGEEEEKREKWCHMTQE

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.5

35.4

Major BPS

-0

1.3

56.7

38.7

Major PPT

82.7

0.74

0.8

77.1

31.6

Minor 5ss

27.4

-2.6

3.2

35.6

41.2

Minor BPS

37.7

-1

2.4

44.2

47.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005402

18869976 - 18876373

6398