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Intron Name: Anas_platyrhynchos_platyrhynchos_12_18875204_18875465_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18875204 - 18875465

Intron Length:

262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTGTGCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACCCAA

U12 Branch Point Sequence:

TGTGCCAAACCC

Flanking Amino Acid:

EWFARYVSAQRCNSKCVSEQ

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

48.6

-0

1.1

56.4

30.9

Major PPT

72.3

0.5

0.9

65.6

36.1

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

-0.4

2.2

59.82

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043031

18869976 - 18876373

6398

ENSAPLT00000005402

18869976 - 18876373

6398