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Intron Name: Anas_platyrhynchos_platyrhynchos_12_18896089_18896653_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18896089 - 18896653

Intron Length:

565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTACA

5'SS Class:

major

3'SS Sequence:

TCCCTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAACCAT

U12 Branch Point Sequence:

AAGGCTGCAACC

Flanking Amino Acid:

GRKAKGTKITGDPNIPAGQQ

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

70.1

35.6

Major BPS

48.2

-0.1

1.3

56.5

38.9

Major PPT

83.7

0.76

0.7

76.2

32.4

Minor 5ss

33.5

-1.9

2.7

44.7

42.7

Minor BPS

42.3

-0.6

2.1

49.66

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040835

18894327 - 18924169

29843

ENSAPLT00000031779

18894327 - 18924276

29950

ENSAPLT00000027677

18894327 - 18924169

29843