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Intron Name: Anas_platyrhynchos_platyrhynchos_12_18899865_18906979_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18899865 - 18906979

Intron Length:

7115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTGGT

5'SS Class:

major

3'SS Sequence:

TGTCCCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

CTTGTTTTATGT

Flanking Amino Acid:

GCPAEMCMPNVDGLFIIGWM

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.3

76.2

39.9

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

79.9

0.67

0.8

73.6

31.4

Minor 5ss

35.8

-1.6

3.3

48.4

41.2

Minor BPS

47.4

-0.1

66.05

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031779

18894327 - 18924276

29950