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Intron Name: Anas_platyrhynchos_platyrhynchos_12_18941339_18943192_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18941339 - 18943192

Intron Length:

1854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TGTCGCCCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCTTCATACATT

Flanking Amino Acid:

KKLKTQLELEKEKSEKRCLN

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

69.9

41.1

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

73.9

0.54

0.9

65.6

36.2

Minor 5ss

33.8

-1.8

3.2

40.5

39.9

Minor BPS

47.5

-0.1

2.3

72.41

Associated Gene:

Gene:

ZCCHC14

Ensembl Gene ID:

ENSAPLG00000005595

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005794

18937277 - 18985302

48026