Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_18948003_18948211_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18948003 - 18948211

Intron Length:

209

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGCA

5'SS Class:

major

3'SS Sequence:

CCTCCACCTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTATTTTTAATA

Flanking Amino Acid:

STEVTEFISKLSQLYPDENL

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

69.1

35.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.3

0.46

0.8

66.6

28.5

Minor 5ss

28.9

-2.4

3.5

38.8

46.5

Minor BPS

69.5

0.61

1.2

71.01

35.8

Associated Gene:

Gene:

ZCCHC14

Ensembl Gene ID:

ENSAPLG00000005595

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005794

18937277 - 18985302

48026