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Intron Name: Anas_platyrhynchos_platyrhynchos_12_18972124_18984282_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18972124 - 18984282

Intron Length:

12159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

GTTTATTAAACT

Flanking Amino Acid:

AVATYPGCHKVTPRSETPIN

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

75.7

34.4

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

95.4

1.02

0.6

88.7

28.3

Minor 5ss

30.4

-2.2

3.5

42.4

45.1

Minor BPS

61.6

0.44

1.8

81.57

39.9

Associated Gene:

Gene:

ZCCHC14

Ensembl Gene ID:

ENSAPLG00000005595

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005794

18937277 - 18985302

48026

ENSAPLT00000045351

18962065 - 18985302

23238

ENSAPLT00000035446

18968048 - 18985302

17255