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Intron Name: Anas_platyrhynchos_platyrhynchos_12_18984298_19020489_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18984298 - 19020489

Intron Length:

36192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGTCGC

5'SS Class:

major

3'SS Sequence:

CTCCTCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATGAA

U12 Branch Point Sequence:

TTTCCTTTCGCC

Flanking Amino Acid:

TAGHPPCGSPGTYQGQWVGG

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

1.1

58.1

43.2

Major BPS

50.5

0.01

1.1

43.3

37.8

Major PPT

77.4

0.62

0.7

72.3

25.8

Minor 5ss

32.7

-2

3.1

35.4

41.3

Minor BPS

43.7

-0.5

3.5

71.59

39.8

Associated Gene:

Gene:

JPH3

Ensembl Gene ID:

ENSAPLG00000006426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029302

18983943 - 19049423

65481