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Intron Name: Anas_platyrhynchos_platyrhynchos_12_19021268_19037414_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19021268 - 19037414

Intron Length:

16147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGG

5'SS Class:

strong_major

3'SS Sequence:

CGTTGCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CCCCTCTCACAC

Flanking Amino Acid:

AKQKAEIAASRTSHSRAKAE

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

70.4

42.5

Major BPS

72.7

0.56

30.1

Major PPT

76.9

0.61

0.9

69.4

36.8

Minor 5ss

36.1

-1.6

3.3

46.8

48.5

Minor BPS

-0.7

1.7

40.16

39.6

Associated Gene:

Gene:

JPH3

Ensembl Gene ID:

ENSAPLG00000006426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006652

19006757 - 19049423

42667

ENSAPLT00000029302

18983943 - 19049423

65481