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Intron Name: Anas_platyrhynchos_platyrhynchos_12_19041944_19049342_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19041944 - 19049342

Intron Length:

7399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAC

U12 Branch Point Sequence:

CACCTCCTAACT

Flanking Amino Acid:

DNGDALKSSTGSAPILVVMV

Intron Amino Acid Position:

735

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

73.1

43.9

Major BPS

0.55

71.8

31.4

Major PPT

89.5

0.89

0.6

84.5

23.2

Minor 5ss

35.6

-1.6

2.7

43.3

43.7

Minor BPS

52.1

0.14

1.7

66.87

43.6

Associated Gene:

Gene:

JPH3

Ensembl Gene ID:

ENSAPLG00000006426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006652

19006757 - 19049423

42667

ENSAPLT00000029302

18983943 - 19049423

65481