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Intron Name: Anas_platyrhynchos_platyrhynchos_12_19068506_19075058_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19068506 - 19075058

Intron Length:

6553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

ATGAGTGGAATT

Flanking Amino Acid:

HLATKTWEQIKASGGPSGRS

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

35.3

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

87.2

0.84

0.7

84.6

30.3

Minor 5ss

36.1

-1.6

3.3

49.5

41.2

Minor BPS

38.9

-0.7

2.2

55.24

41.5

Associated Gene:

Gene:

KLHDC4

Ensembl Gene ID:

ENSAPLG00000006655

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006944

19005456 - 19081262

75807

ENSAPLT00000029834

19055630 - 19081262

25633