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Intron Name: Anas_platyrhynchos_platyrhynchos_12_19145417_19147286_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19145417 - 19147286

Intron Length:

1870

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGGGATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CAAATTTTAAAA

Flanking Amino Acid:

VDALPAVKHKDTVIEFDVFD

Intron Amino Acid Position:

256

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

88.1

25.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.34

62.2

43.6

Minor 5ss

40.3

-1.1

3.4

58.5

40.4

Minor BPS

50.3

0.01

1.4

54.91

37.4

Associated Gene:

Gene:

CA5B

Ensembl Gene ID:

ENSAPLG00000007542

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019801

19142172 - 19161707

19536

ENSAPLT00000007835

19143172 - 19154183

11012