Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_19184036_19185368_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19184036 - 19185368

Intron Length:

1333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTACAATA

5'SS Class:

major

3'SS Sequence:

CTCCCCTTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TTCTCTTGCATT

Flanking Amino Acid:

EINCQDPSIKSFLYSINQTI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.3

72.9

38.1

Major BPS

73.1

0.58

79.6

29.1

Major PPT

76.7

0.6

0.7

68.8

31.6

Minor 5ss

-1.2

2.9

50.1

45.8

Minor BPS

0.21

1.9

76.06

41.4

Associated Gene:

Gene:

BANP

Ensembl Gene ID:

ENSAPLG00000007452

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048432

19182426 - 19314416

131991

ENSAPLT00000027115

19182426 - 19314416

131991

ENSAPLT00000007763

19182426 - 19314680

132255