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Intron Name: Anas_platyrhynchos_platyrhynchos_12_19247642_19309826_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19247642 - 19309826

Intron Length:

62185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAACA

5'SS Class:

strong_major

3'SS Sequence:

GCTTTGCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

GCTTTCTCCACT

Flanking Amino Acid:

HQVHVGQDGQVLQGAQLIAV

Intron Amino Acid Position:

440

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

74.4

Major BPS

73.5

0.59

81.3

29.9

Major PPT

75.2

0.57

0.9

68.9

37.1

Minor 5ss

32.4

-2

3.1

40.9

45.1

Minor BPS

0.14

72.31

44.6

Associated Gene:

Gene:

BANP

Ensembl Gene ID:

ENSAPLG00000007452

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048432

19182426 - 19314416

131991

ENSAPLT00000027115

19182426 - 19314416

131991

ENSAPLT00000007763

19182426 - 19314680

132255