Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_195685_195769_F

Intron Information:

Intron Rank:

148780

Intron Class:

major

Intron Phase:

Intron Coordinates:

195685 - 195769

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TTCCCACCGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

ATCATTGCAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

70.9

39.2

Major BPS

0.57

1.2

41.2

Major PPT

66.3

0.37

58.8

37.3

Minor 5ss

38.7

-1.3

2.8

51.8

39.1

Minor BPS

42.7

-0.5

2.1

52.73

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043644

195573 - 196752

1180