Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_19602514_19611951_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19602514 - 19611951

Intron Length:

9438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

AGCATCTCAACT

Flanking Amino Acid:

KPKPRSPLLPSRQPEPPKKE

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

25.6

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

91.2

0.93

0.6

84.1

30.8

Minor 5ss

35.3

-1.7

3.2

50.4

Minor BPS

54.8

0.23

1.6

68.04

42.4

Associated Gene:

Gene:

ZC3H18

Ensembl Gene ID:

ENSAPLG00000007302

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023632

19590820 - 19624794

33975

ENSAPLT00000007597

19590820 - 19624794

33975