Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_19618107_19620175_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19618107 - 19620175

Intron Length:

2069

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGCCT

5'SS Class:

major

3'SS Sequence:

TGGCTCTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

GCGACTGTAACG

Flanking Amino Acid:

SHSASGSRKSRSLSVSSVSS

Intron Amino Acid Position:

743

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

60.5

Major BPS

62.2

0.3

1.2

38.7

Major PPT

78.2

0.64

0.9

69.3

41.7

Minor 5ss

31.7

-2.1

3.6

48.5

47.2

Minor BPS

-0.4

2.1

48.14

45.4

Associated Gene:

Gene:

ZC3H18

Ensembl Gene ID:

ENSAPLG00000007302

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023632

19590820 - 19624794

33975

ENSAPLT00000007597

19590820 - 19624794

33975