Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_19651603_19651700_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19651603 - 19651700

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGGGAG

5'SS Class:

major

3'SS Sequence:

ACCGTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAC

U12 Branch Point Sequence:

CGGGGCTGAGCC

Flanking Amino Acid:

TAKEELLQMLRGHLILHTAR

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

60.4

40.3

Major BPS

57.2

0.18

1.4

63.1

44.5

Major PPT

63.9

0.31

53.6

Minor 5ss

23.6

-3

3.3

43.5

Minor BPS

39.7

-0.8

43.46

Associated Gene:

Gene:

CTU2

Ensembl Gene ID:

ENSAPLG00000007265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023904

19650026 - 19652438

2413

ENSAPLT00000007531

19650011 - 19652442

2432