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Intron Name: Anas_platyrhynchos_platyrhynchos_12_19694888_19697375_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19694888 - 19697375

Intron Length:

2488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TTGTTTCTAACA

Flanking Amino Acid:

QLNVCDKAVMNWSPPGCEKL

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

36.6

Major BPS

78.6

0.71

79.6

32.9

Major PPT

81.1

0.7

0.9

77.7

35.5

Minor 5ss

30.8

-2.2

2.6

33.6

35.6

Minor BPS

63.9

0.43

1.6

75.22

36.5

Associated Gene:

Gene:

GALNS

Ensembl Gene ID:

ENSAPLG00000014112

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038247

19694117 - 19736012

41896