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Intron Name: Anas_platyrhynchos_platyrhynchos_12_19738475_19738594_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19738475 - 19738594

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

ACTCCCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TATTAATTAAAC

Flanking Amino Acid:

TALRDNEIRSMFRKLHNSYT

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.3

40.2

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

80.6

0.69

0.8

30.9

Minor 5ss

33.9

-1.8

3.1

37.1

40.4

Minor BPS

57.2

0.21

1.9

71.88

Associated Gene:

Gene:

TRAPPC2L

Ensembl Gene ID:

ENSAPLG00000014015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014591

19735875 - 19739510

3636