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Intron Name: Anas_platyrhynchos_platyrhynchos_12_19742151_19742811_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19742151 - 19742811

Intron Length:

661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGGGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAA

U12 Branch Point Sequence:

GGGTTTGTAAGC

Flanking Amino Acid:

QQARLRGRMYRCVNAVHPAA

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

62.3

0.31

1.4

63.7

43.9

Major PPT

72.5

0.51

69.2

41.8

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

43.4

-0.5

2.1

50.5

40.8

Associated Gene:

Gene:

PABPN1L

Ensembl Gene ID:

ENSAPLG00000009174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031286

19740980 - 19745527

4548