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Intron Name: Anas_platyrhynchos_platyrhynchos_12_19743131_19743512_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19743131 - 19743512

Intron Length:

382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CTCTGCTCACCC

Flanking Amino Acid:

LCDKFSGHPKGYAYIEFEEK

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.9

35.3

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

83.1

0.74

0.7

76.9

Minor 5ss

29.4

-2.4

3.1

33.3

41.7

Minor BPS

45.4

-0.3

2.2

57.93

47.1

Associated Gene:

Gene:

PABPN1L

Ensembl Gene ID:

ENSAPLG00000009174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009542

19742503 - 19745527

3025

ENSAPLT00000031286

19740980 - 19745527

4548