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Intron Name: Anas_platyrhynchos_platyrhynchos_12_19743620_19744050_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19743620 - 19744050

Intron Length:

431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GCTGTGGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TTGTGCTCATGA

Flanking Amino Acid:

VDQRSIYVGNVDYGGTAEEL

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

69.1

41.9

Major BPS

79.7

0.74

79.6

35.6

Major PPT

0.43

1.1

60.9

44.7

Minor 5ss

34.5

-1.8

3.3

44.8

43.4

Minor BPS

43.2

-0.5

2.3

59.05

46.7

Associated Gene:

Gene:

PABPN1L

Ensembl Gene ID:

ENSAPLG00000009174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009542

19742503 - 19745527

3025

ENSAPLT00000031286

19740980 - 19745527

4548