Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_19795282_19795796_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19795282 - 19795796

Intron Length:

515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGAG

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GCTTTCTTATGT

Flanking Amino Acid:

FVRAFCQENIRLMVSGSAAL

Intron Amino Acid Position:

559

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.3

39.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

81.2

0.7

0.9

76.8

37.3

Minor 5ss

30.6

-2.2

3.4

39.1

46.7

Minor BPS

54.4

0.22

1.9

71.72

45.4

Associated Gene:

Gene:

ACSF3

Ensembl Gene ID:

ENSAPLG00000003332

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003397

19780360 - 19821657

41298