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Intron Name: Anas_platyrhynchos_platyrhynchos_12_19984608_19985610_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19984608 - 19985610

Intron Length:

1003

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTC|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

TGCATGTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CTGCTTTTGATT

Flanking Amino Acid:

HPGGTPHGQVNVTLLYTMRV

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.3

59.3

40.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

67.2

0.39

57.5

43.1

Minor 5ss

29.1

-2.4

3.1

35.1

35.5

Minor BPS

55.7

0.26

1.2

66.85

Associated Gene:

Gene:

SPG7

Ensembl Gene ID:

ENSAPLG00000004074

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004240

19976920 - 20007481

30562