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Intron Name: Anas_platyrhynchos_platyrhynchos_12_19990116_19990821_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

19990116 - 19990821

Intron Length:

706

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTTAGAATT

5'SS Class:

major

3'SS Sequence:

AACTGGGGGCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

AGATGTCTAACT

Flanking Amino Acid:

PQEVLAAHLLAIFYSYGCEA

Intron Amino Acid Position:

322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.2

76.6

38.6

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

47.7

-0.1

1.2

34.8

44.8

Minor 5ss

35.3

-1.7

43.4

Minor BPS

48.8

-0

2.1

68.83

41.7

Associated Gene:

Gene:

SPG7

Ensembl Gene ID:

ENSAPLG00000004074

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004240

19976920 - 20007481

30562