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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20067674_20068646_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

20067674 - 20068646

Intron Length:

973

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGGGTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

TGTTATTGTATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

75.2

35.1

Major BPS

0.47

1.2

61.1

45.5

Major PPT

74.1

0.54

68.8

41.9

Minor 5ss

32.6

-2

3.7

46.4

48.9

Minor BPS

47.7

-0.1

1.9

70.4

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020578

20067436 - 20091162

23727