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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20080492_20080928_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20080492 - 20080928

Intron Length:

437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGTCG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTGATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAA

U12 Branch Point Sequence:

TCTTTCTTGATC

Flanking Amino Acid:

RTKESFSFCTRFCTAAISYL

Intron Amino Acid Position:

436

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

38.1

Major BPS

65.6

0.39

0.9

55.4

32.7

Major PPT

76.8

0.6

77.6

35.4

Minor 5ss

31.6

-2.1

3.2

38.5

46.7

Minor BPS

73.9

0.73

1.1

76.61

34.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020578

20067436 - 20091162

23727

ENSAPLT00000017389

20068647 - 20091162

22516

ENSAPLT00000006758

20068647 - 20091699

23053

ENSAPLT00000038929

20068647 - 20091162

22516