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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20081026_20081277_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20081026 - 20081277

Intron Length:

252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGGA

5'SS Class:

strong_major

3'SS Sequence:

GCCTTTGTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCAGAA

U12 Branch Point Sequence:

TTTTGTGGAAAA

Flanking Amino Acid:

ALVPPSLVKKLQYIVPRLSL

Intron Amino Acid Position:

469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.5

36.7

Major BPS

49.9

-0

1.1

46.7

38.9

Major PPT

78.8

0.65

0.9

75.9

Minor 5ss

29.1

-2.4

3.4

38.8

46.3

Minor BPS

43.9

-0.4

2.4

65.08

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006758

20068647 - 20091699

23053

ENSAPLT00000038929

20068647 - 20091162

22516

ENSAPLT00000020578

20067436 - 20091162

23727

ENSAPLT00000017389

20068647 - 20091162

22516