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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20083199_20083683_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20083199 - 20083683

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTCTCT

5'SS Class:

weak_major

3'SS Sequence:

CTCTCTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTCAC

U12 Branch Point Sequence:

GTCTCTCTATTT

Flanking Amino Acid:

IINTILDFSQRLDLGSYGQL

Intron Amino Acid Position:

595

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

66.9

39.1

Major BPS

67.1

0.43

1.2

69.3

37.7

Major PPT

83.3

0.75

0.8

80.9

29.5

Minor 5ss

59.3

0.31

2.3

74.9

41.1

Minor BPS

49.1

0.01

1.9

68.9

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020578

20067436 - 20091162

23727

ENSAPLT00000017389

20068647 - 20091162

22516

ENSAPLT00000006758

20068647 - 20091699

23053

ENSAPLT00000038929

20068647 - 20091162

22516