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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20083751_20083983_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20083751 - 20083983

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATTACA

5'SS Class:

strong_major

3'SS Sequence:

CCACCTTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAA

U12 Branch Point Sequence:

CCCTGATAAACA

Flanking Amino Acid:

VNPDILCKLQELVLELGCRR

Intron Amino Acid Position:

618

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

78.6

29.8

Major BPS

63.5

0.33

1.2

64.3

39.6

Major PPT

66.6

0.37

0.9

64.8

36.1

Minor 5ss

30.6

-2.2

2.5

40.8

Minor BPS

42.9

-0.5

2.2

51.36

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017389

20068647 - 20091162

22516

ENSAPLT00000006758

20068647 - 20091699

23053

ENSAPLT00000038929

20068647 - 20091162

22516

ENSAPLT00000020578

20067436 - 20091162

23727