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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20085012_20085402_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20085012 - 20085402

Intron Length:

391

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAACTCCT

5'SS Class:

major

3'SS Sequence:

TATCCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTATAT

U12 Branch Point Sequence:

TCTTCTTGTATT

Flanking Amino Acid:

PYDITSHFFRGLLNASLDCE

Intron Amino Acid Position:

729

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.2

66.3

45.2

Major BPS

70.4

0.51

67.1

39.4

Major PPT

82.4

0.73

0.8

73.6

36.6

Minor 5ss

-0.9

2.9

44.4

Minor BPS

56.6

0.29

1.8

76.12

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020578

20067436 - 20091162

23727

ENSAPLT00000017389

20068647 - 20091162

22516

ENSAPLT00000006758

20068647 - 20091699

23053

ENSAPLT00000038929

20068647 - 20091162

22516