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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20085843_20086696_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20085843 - 20086696

Intron Length:

854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTCTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

CGGTCATTCATG

Flanking Amino Acid:

RLRECQSWATSFLSSGGVFP

Intron Amino Acid Position:

801

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

83.9

0.84

73.9

41.3

Major PPT

0.79

0.7

84.8

Minor 5ss

-1.1

2.7

50.1

46.4

Minor BPS

45.6

-0.4

2.1

48.76

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017389

20068647 - 20091162

22516

ENSAPLT00000006758

20068647 - 20091699

23053

ENSAPLT00000038929

20068647 - 20091162

22516

ENSAPLT00000020578

20067436 - 20091162

23727