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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20088622_20089708_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20088622 - 20089708

Intron Length:

1087

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACTCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGACTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

TCCTTTCTGACT

Flanking Amino Acid:

DLISAKIAPKEGVDFQTSLE

Intron Amino Acid Position:

870

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

35.6

Major BPS

68.7

0.47

0.9

67.9

Major PPT

0.56

0.9

39.9

Minor 5ss

43.5

-0.7

2.9

56.9

47.3

Minor BPS

53.2

0.18

1.7

70.58

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017389

20068647 - 20091162

22516

ENSAPLT00000006758

20068647 - 20091699

23053

ENSAPLT00000038929

20068647 - 20091162

22516

ENSAPLT00000020578

20067436 - 20091162

23727