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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20090304_20090666_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20090304 - 20090666

Intron Length:

363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

TGACTTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACACAT

U12 Branch Point Sequence:

TTGGCGCTGACT

Flanking Amino Acid:

HSRLLPLAFYSLTPAFDHEL

Intron Amino Acid Position:

930

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.1

Major BPS

52.1

0.05

1.2

37.5

Major PPT

71.7

0.49

0.9

65.3

36.1

Minor 5ss

30.9

-2.2

3.6

45.9

49.3

Minor BPS

46.3

-0.2

2.4

71.61

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017389

20068647 - 20091162

22516

ENSAPLT00000006758

20068647 - 20091699

23053

ENSAPLT00000038929

20068647 - 20091162

22516

ENSAPLT00000020578

20067436 - 20091162

23727