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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20094011_20094089_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20094011 - 20094089

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACAGCAA

U12 Branch Point Sequence:

CTGACAGCAAGC

Flanking Amino Acid:

PGWKKKIKCEREELPTIYKC

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.6

Major BPS

43.2

-0.4

1.3

45.7

37.1

Major PPT

82.1

0.72

0.8

76.1

32.5

Minor 5ss

32.9

-2

2.9

40.3

45.4

Minor BPS

35.3

-1.1

2.3

44.11

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006496

20092281 - 20098353

6073