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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20096244_20096787_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20096244 - 20096787

Intron Length:

544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

TTATCTCTAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTATCTCTAACA

Flanking Amino Acid:

SPCHRRAVPQPRETSAAGKG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

0.63

0.9

35.2

Minor 5ss

30.9

-2.2

3.6

45.9

49.3

Minor BPS

70.6

0.64

1.6

81.12

33.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006496

20092281 - 20098353

6073