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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20121987_20122062_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20121987 - 20122062

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCCCAGGGG

5'SS Class:

weak_major

3'SS Sequence:

AGGCTCCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCGCAT

U12 Branch Point Sequence:

CTCGCATCACCC

Flanking Amino Acid:

FLEGTGKGWEVHYGSWFDHV

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.8

0.02

1.3

44.2

40.2

Major BPS

57.6

0.19

1.4

38.9

Major PPT

62.9

0.29

0.9

55.1

35.8

Minor 5ss

11.6

-4.4

3.6

11.5

28.2

Minor BPS

42.1

-0.6

2.1

51.1

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042229

20121107 - 20123999

2893