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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20122205_20122371_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20122205 - 20122371

Intron Length:

167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

CAACCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

GTGTCCCCAACC

Flanking Amino Acid:

APLLQGSKAKVIYVARNPKD

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

61.6

0.26

0.9

50.9

33.4

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

55.1

0.14

1.9

68.65

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042229

20121107 - 20123999

2893