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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20122581_20123674_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20122581 - 20123674

Intron Length:

1094

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

CCCCCTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAT

U12 Branch Point Sequence:

AGTGCCCTGACG

Flanking Amino Acid:

DVVIVTYPKSGTTWMQEILT

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

35.2

Major BPS

57.1

0.18

1.4

66.4

42.2

Major PPT

72.4

0.5

0.8

31.1

Minor 5ss

26.7

-2.7

3.3

38.5

46.6

Minor BPS

-0.1

1.9

58.68

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042229

20121107 - 20123999

2893